People
Henry Wan
2023
Genomic diversity, pathogenicity and antimicrobial resistance of Escherichia coli isolated from poultry in the southern United States. Feng A, Akter S, Leigh S A, Wang H, Pharr G T, Evans J, Branton S L, Landinez M P, Pace L, Wan X. BMC Microbiology; Volume 23, Issue 1.
Date published: January 16, 2023Featured in this article: Aijing Feng, XiuFeng “Henry” Wan.
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Glycoproteomic Analyses of Influenza A Viruses Using timsTOF Pro MS. Wong T L, Mooney B P, Cavallero G J, Guan M, Li L, Zaia J, Wan X. Journal of Proteome Research; Volume 22, Issue 1, Pages 62 - 77.
Date published: January 6, 2023Featured in this article: Minhui Guan, XiuFeng “Henry” Wan.
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Global dissemination of influenza A virus is driven by wild bird migration through arctic and subarctic zones. Gass, J D, Dusek R J, Hall J S, Hallgrimsson G T, Halldorsson H P, Vignisson S R, Ragnarsdottir S B, Jonsson J E, Krauss S, Wong S, Wan X, Akter S, Sreevatsan S, Trovao N S, Nutter F B, Runstadlet J A, Hill N J. Molecular Ecology; Volume 32, Issue 1, Pages 198 - 213.
Date published: January 1, 2023Featured in this article: XiuFeng “Henry” Wan.
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2022
Exposure of white-tailed deer in North America to influenza D virus. Guan M, Jacobson O, Sarafianos G, Baroch J, Deliberto T J, Wan X. Virology; Volume 573, Pages 111 - 117.
Date published: August 1, 2022Featured in this article: Minhui Guan, George Sarafianos, George Sarafianos , XiuFeng “Henry” Wan.
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Influenza Virus Infections in Polarized Cells. Praena B and Wan X. Viruses; Volume 14(6).
Date published: June 15, 2022Featured in this article: Beatriz Praena Garcia, XiuFeng “Henry” Wan.
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Antigenic characterization of influenza and SARS-CoV-2 viruses. Wang Y, Tang C.Y., Xan X.F. . Analytical and Bioanalytical Chemistry; Volume 414, Issue 9, Pages 2841 - 2881.
Date published: April 1, 2022Featured in this article: Yang Wang, XiuFeng “Henry” Wan.
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Intrauterine Fetal Demise in the Third Trimester of Pregnancy Associated with Mild Infection with the SARS-CoV-2 Delta Variant Without Protection from Vaccination. Guan M., Johannesen E, Tang C.Y, Hsu A.L, Barnes C.L, Burman C.L, McElroy J.A, Wan X.F. Journal of Infectious Diseases; Volume 225, Issue 5, Pages 748 - 753.
Date published: March 1, 2022Featured in this article: XiuFeng “Henry” Wan.
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Defining biological and biophysical properties of SARS-CoV-2 genetic material in wastewater. Robinson CA, Hsieh H-Y, Hsu S-Y, Wang Y, Salcedo BT, Belenchia A, Klutts J, Zemmer S, Reynolds M, Semkiw E, Foley T, Wan X, Wieberg CG, Wenzel J, Lin C-H, Johnson MC. Science of the Total Environment; 807:150786.
Date published: February 10, 2022Featured in this article: XiuFeng “Henry” Wan, Marc Johnson.
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Time-Dependent Proinflammatory Responses Shape Virus Interference during Coinfections of Influenza A Virus and Influenza D Virus. Guan M.,Blackmon S.,Olivier A.K.,Zhang X.Zhang X.,Liu L.Woolums A.,Crenshaw M.A.,Liao S.F., Webby R.,,Epperson W.,Wan X.-F.. Viruses; Volume 14, Issue 2.
Date published: February 1, 2022Featured in this article: XiuFeng “Henry” Wan.
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2021
Reinfection with two genetically distinct SARS-CoV-2 viruses within 19 days. Tang CY, Wang Y, McElroy JA, Li T, Hammer R, Ritter D, Lidl GM, Webby R, Hang J, Wan X-F. Journal of Medical Virology; 93(10):5700-5703.
Date published: October 1, 2021Featured in this article: XiuFeng “Henry” Wan.
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Cell-adapted mutations and antigenic diversity of influenza b viruses in Missouri, 2019–2020 season. Tang CY, Segovia K, McElroy JA, Li T, Guan M, Zhang X, Misra S, Hang J, Wan X-F. Viruses; 13(10):1896.
Date published: October 1, 2021Featured in this article: XiuFeng “Henry” Wan.
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Triple reassortment increases compatibility among viral ribonucleoprotein genes of contemporary avian and human influenza A viruses. Waters K, Gao C, Ykema M, Han L, Voth L, Tao YJ, Wan X-F. PLoS Pathogens; 17(10):e1009962.
Date published: October 1, 2021Featured in this article: XiuFeng “Henry” Wan.
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Characterization of Subtype H6 Avian Influenza A Viruses Isolated From Wild Birds in Poyang Lake, China. Wan Z, Kan Q, Zhao Z, Shao H, Deliberto TJ, Wan X-F, Qin A, Ye J. Frontiers in Veterinary Science; 8:685399.
Date published: September 13, 2021Featured in this article: XiuFeng “Henry” Wan.
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SARS-CoV-2 show no infectivity at later stages in a prolonged COVID-19 patient despite positivity in RNA testing. Wan X-F, Tang CY, Ritter D, Wang Y, Li T, Segovia K, Kosikova M, Johnson M, Kwon HJ, Xie H, Hammer RD, McElroy JA, Hamid A, Collins ND, Hang J, Camp S. Journal of Medical Virology; 93(7):4570-4575.
Date published: July 1, 2021Featured in this article: XiuFeng “Henry” Wan, Marc Johnson.
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Variations outside the conserved motifs of PB1 catalytic active site may affect replication efficiency of the RNP complex of influenza A virus. Waters K, Wan HJ, Han L, Xue J, Ykema M, Tao YJ, Wan X-F. Virology; 559:145-155.
Date published: July 1, 2021Featured in this article: XiuFeng “Henry” Wan.
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Erratum: Are pangolins the intermediate host of the 2019 novel coronavirus (SARSCoV-2)? (PLoS Pathogens (2020) 16:5 (e1008421) DOI: 10.1371/journal.ppat.1008421). Liu P, Jiang J-Z, Wan X-F, Hua Y, Li L, Zhou J, Wang X, Hou F, Chen J, Zou J, Chen J. PLoS Pathogens; 17(6):e1009664.
Date published: June 1, 2021Featured in this article: XiuFeng “Henry” Wan.
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Reduced Influenza B-Specific Postvaccination Antibody Cross-reactivity in the B/Victoria Lineage-Predominant 2019/20 Season. Xie H, Xiang R, Wan HJ, Plant EP, Radvak P, Kosikova M, Li X, Zoueva O, Ye Z, Wan X-F. Clinical Infectious Diseases; 72(11):E776-E783.
Date published: June 1, 2021Featured in this article: XiuFeng “Henry” Wan.
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Rapid high-throughput whole-genome sequencing of SARS-CoV-2 by using one-step reverse transcription-PCR amplification with an integrated microfluidic system and next-generation sequencing. Li T, Chung HK, Pireku PK, Beitzel BF, Sanborn MA, Tang CY, Hammer RD, Ritter D, Wan X-F, Berry IM, Hang J. Journal of Clinical Microbiology; 59(5):e02784-20.
Date published: May 1, 2021Featured in this article: XiuFeng “Henry” Wan.
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Terminal Epitope-Dependent Branch Preference of Siglecs Toward N-Glycans. Wang S, Chen C, Guan M, Liu D, Wan X-F, Li L. Frontiers in Molecular Biosciences; 8:645999.
Date published: April 29, 2021Featured in this article: XiuFeng “Henry” Wan.
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A review on medical management of inflammatory bowel disease during the coronavirus disease 2019 pandemic. Chela H, Pasha SB, Wan X-F, Ghouri YA. Journal of Gastroenterology and Hepatology (Australia); 36(4):918-926.
Date published: April 1, 2021Featured in this article: XiuFeng “Henry” Wan.
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H7N1 Low Pathogenicity Avian Influenza Viruses in Poultry in the United States during 2018. Lee D-H, Killian ML, Deliberto TJ, Wan X-F, Lei L, Swayne DE, Torchetti MK. Avian Diseases; 65(1):59-62.
Date published: March 1, 2021Featured in this article: XiuFeng “Henry” Wan.
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Placental SARS-CoV-2 in a pregnant woman with mild COVID-19 disease. Hsu AL, Guan M, Johannesen E, Stephens AJ, Khaleel N, Kagan N, Tuhlei BC, Wan X-F. Journal of Medical Virology; 93(2):1038-1044.
Date published: February 1, 2021Featured in this article: XiuFeng “Henry” Wan.
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2020
Antibody responses to sars-cov-2 antigens in humans and animals. Kim H, Seiler P, Jones JC, Ridout G, Camp KP, Fabrizio TP, Jeevan T, Miller LA, Throm RE, Ferrara F, Fredrickson RL, Lowe JF, Wang L, Odemuyiwa SO, Wan X-F, Webby RJ. Vaccines; 8(4):1-15.
Date published: December 1, 2020Featured in this article: XiuFeng “Henry” Wan.
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Cross-Protection by Inactivated H5 Prepandemic Vaccine Seed Strains against Diverse Goose/Guangdong Lineage H5N1 Highly Pathogenic Avian Influenza Viruses. Criado MF, Sá e Silva M, Lee D-H, de Lima Salge CA, Spackman E, Donis R, Wan X-F, Swayne DE. Journal of Virology; 94(24):e00720-20.
Date published: December 1, 2020Featured in this article: XiuFeng “Henry” Wan.
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Tissue Tropisms of Avian Influenza A Viruses Affect Their Spillovers from Wild Birds to Pigs. Zhang X, Cunningham FL, Li L, Hanson-Dorr K, Liu L, Waters K, Guan M, Olivier AK, Schmit BS, Nolting JM, Bowman AS, Torchetti MK, DeLiberto TJ, Wan X-F. Journal of Virology; 94(24):e00847-20.
Date published: December 1, 2020Featured in this article: XiuFeng “Henry” Wan.
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Limited cross-protection provided by prior infection contributes to high prevalence of influenza D viruses in cattle. Wan X-F, Ferguson L, Oliva J, Rubrum A, Eckard L, Zhang X, Woolums AR, Lion A, Meyer G, Murakami S, Ma W, Horimoto T, Webby R, Ducatez MF, Epperson W. Journal of Virology; 94(18):e00240-20.
Date published: September 1, 2020Featured in this article: XiuFeng “Henry” Wan.
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Measuring Site-specific Glycosylation Similarity between Influenza a Virus Variants with Statistical Certainty. Chang D, Hackett WE, Zhong L, Wan X-F, Zaia J. Molecular and Cellular Proteomics; 19(9):1533-1545.
Date published: September 1, 2020Featured in this article: XiuFeng “Henry” Wan.
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Comprehensive N- and O-glycosylation mapping of human coagulation factor V. Ma C, Liu D, Li D, Zhang J, Xu X-Q, Zhu H, Wan X-F, Miao CH, Konkle BA, Onigman P, Xiao W, Li L. Journal of Thrombosis and Haemostasis; 18(8):1884-1892.
Date published: August 1, 2020Featured in this article: XiuFeng “Henry” Wan.
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Transport and fate of human expiratory droplets – A modeling approach. Wang B, Wu H, Wan X-F. Physics of Fluids; 32(8):083307.
Date published: August 1, 2020Featured in this article: XiuFeng “Henry” Wan.
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Environmental factor(s) and animal vector(s) associated with atypical Aeromonas hydrophila abundance and dissemination among channel catfish ponds. Cunningham FL, Hanson-Dorr KC, Ford L, Middleton DR, Crain A, Durst L, Ware C, Griffin MJ, Mischke CC, Wan X-F, Hanson LA. Journal of the World Aquaculture Society; 51(3):750-762.
Date published: June 1, 2020Featured in this article: XiuFeng “Henry” Wan.
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HA stabilization promotes replication and transmission of swine H1N1 gamma influenza viruses in ferrets. Hu M, Yang G, De Beauchamp J, Crumpton JC, Kim H, Li L, Wan X-F, Kercher L, Bowman AS, Webster RG, Webby RJ, Russell CJ. eLife; 9:1-23.
Date published: June 1, 2020Featured in this article: XiuFeng “Henry” Wan.
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Multi-task learning sparse group lasso: A method for quantifying antigenicity of influenza A(H1N1) virus using mutations and variations in glycosylation of Hemagglutinin. Li L, Chang D, Han L, Zhang X, Zaia J, Wan X-F. BMC Bioinformatics; 21(1):1DUMM.
Date published: May 11, 2020Featured in this article: XiuFeng “Henry” Wan.
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Are pangolins the intermediate host of the 2019 novel coronavirus (SARS-CoV-2)?. Liu P, Jiang J-Z, Wan X-F, Hua Y, Li L, Zhou J, Wang X, Hou F, Chen J, Zou J, Chen J. PLoS Pathogens; 16(5):e1008421.
Date published: May 1, 2020Featured in this article: XiuFeng “Henry” Wan.
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Inferring seasonal infection risk at population and regional scales from serology samples. Wilber MQ, Webb CT, Cunningham FL, Pedersen K, Wan X-F, Pepin KM. Ecology; 101(1):e02882.
Date published: January 1, 2020Featured in this article: XiuFeng “Henry” Wan.
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2019
The neuraminidase of A(H3N2) influenza viruses circulating since 2016 is antigenically distinct from the A/Hong Kong/4801/2014 vaccine strain. Wan H, Gao J, Yang H, Yang S, Harvey R, Chen Y-Q, Zheng N-Y, Chang J, Carney PJ, Li X, Plant E, Jiang L, Couzens L, Wang C, Strohmeier S, Wu WW, Shen R-F, Krammer F, Cipollo JF, Wilson PC, Stevens J, Wan X-F, Eichelberger MC, Ye Z. Nature Microbiology; 4(12):2216-2225.
Date published: December 1, 2019Featured in this article: XiuFeng “Henry” Wan.
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Individual-Level Antibody Dynamics Reveal Potential Drivers of Influenza A Seasonality in Wild Pig Populations. Pepin KM, Pedersen K, Wan X-F, Cunningham FL, Webb CT, Wilber MQ. Integrative and Comparative Biology; 59(5):1231-1242.
Date published: November 1, 2019Featured in this article: XiuFeng “Henry” Wan.
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Serologic evidence for influenza a virus exposure in three loon species breeding in Alaska, USA. Uher-Koch BD, Spivey TJ, Van Hemert CR, Schmutz JA, Jiang K, Wan X-F, Ramey AM. Journal of Wildlife Diseases; 55(4):862-867.
Date published: October 1, 2019Featured in this article: XiuFeng “Henry” Wan.
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Influenza Neuraminidase: Underrated Role in Receptor Binding. Wen F, Wan X-F. Trends in Microbiology; 27(6):447-479.
Date published: June 1, 2019Featured in this article: XiuFeng “Henry” Wan.
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Pathogenesis of co-infections of influenza D virus and Mannheimia haemolytica in cattle. Zhang X, Outlaw C, Olivier A, Woolums A, Epperson W, Wan X-F. Veterinary Microbiology; 231:246-253.
Date published: April 1, 2019Featured in this article: XiuFeng “Henry” Wan.
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Survey of arctic alaskan wildlife for influenza a antibodies: Limited evidence for exposure of mammals. Van Hemert C, Spivey TJ, Uher-Koch BD, Atwood TC, Sinnett DR, Meixell BW, Hupp JW, Jiang K, Adams LG, Gustine DD, Ramey AM, Wan X-F. Journal of Wildlife Diseases; 55(2):387-398.
Date published: April 1, 2019Featured in this article: XiuFeng “Henry” Wan.
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Prediction of DNA-binding proteins by interaction fusion feature representation and selective ensemble. You W, Yang Z, Guo G, Wan X-F, Ji G. Knowledge-Based Systems; 163:598-610.
Date published: January 1, 2019Featured in this article: XiuFeng “Henry” Wan.
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Graph-guided multi-task sparse learning model: A method for identifying antigenic variants of influenza A(H3N2) virus. Han L, Li L, Wen F, Zhong L, Zhang T, Wan X-F. Bioinformatics; 35(1):77-87.
Date published: January 1, 2019Featured in this article: XiuFeng “Henry” Wan.
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Aerosol transmission of gull-origin Iceland subtype H10N7 influenza A virus in ferrets. Guan M, Hall JS, Zhang X, Dusek RJ, Olivier AK, Liu L, Li L, Krauss S, Danner A, Li T, Rutvisuttinunt W, Lin X, Hallgrimsson GT, Ragnarsdottir SB, Vignisson SR, TeSlaa J, Nashold SW, Jarman R, Wan X-F. Journal of Virology; 93(13):e00282-19.
Date published: January 1, 2019Featured in this article: XiuFeng “Henry” Wan.
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2018
Evolutionary pathway for the 2017 emergence of a novel highly pathogenic avian influenza A(H7N9) virus among domestic poultry in Tennessee, United States. Li L, DeLiberto TJ, Killian ML, Torchetti MK, Wan X-F. Virology; 525:32-39.
Date published: December 1, 2018Featured in this article: XiuFeng “Henry” Wan.
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Tissue tropisms opt for transmissible reassortants during avian and swine influenza A virus co-infection in swine. Zhang X, Sun H, Cunningham FL, Li L, Hanson-Dorr K, Hopken MW, Cooley J, Long L-P, Baroch JA, Li T, Schmit BS, Lin X, Olivier AK, Jarman RG, DeLiberto TJ, Wan X-F. PLoS Pathogens; 14(12):e1007417.
Date published: December 1, 2018Featured in this article: XiuFeng “Henry” Wan.
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Imprinting of repeated influenza A/H3 exposures on antibody quantity and antibody quality: Implications for seasonal vaccine strain selection and vaccine performance. Kosikova M, Li L, Radvak P, Ye Z, Wan X-F, Xie H. Clinical Infectious Diseases; 67(10):1523-1532.
Date published: October 30, 2018Featured in this article: XiuFeng “Henry” Wan.
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Genetic evidence supports sporadic and independent introductions of subtype H5 low-pathogenic avian influenza A viruses from wild birds to domestic poultry in North America. Li L, Bowman AS, DeLiberto TJ, Killian ML, Krauss S, Nolting JM, Torchetti MK, Ramey AM, Reeves AB, Stallknecht DE, Webby RJ, Wan X-F. Journal of Virology; 92(19):e00913.
Date published: October 1, 2018Featured in this article: XiuFeng “Henry” Wan.
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Mutation W222L at the receptor binding site of hemagglutinin could facilitate viral adaption from equine Influenza A(H3N8) virus to dogs. Wen F, Blackmon S, Olivier AK, Li L, Guan M, Sun H, Wang PG, Wan X-F. Journal of Virology; 92(18):e01115.
Date published: September 1, 2018Featured in this article: XiuFeng “Henry” Wan.
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Influenza D virus infection in feral swine populations, United States. Ferguson L, Luo K, Olivier AK, Cunningham FL, Blackmon S, Hanson-Dorr K, Sun H, Baroch J, Lutman MW, Quade B, Epperson W, Webby R, DeLiberto TJ, Wan X-F. Emerging Infectious Diseases; 24(6):1020-1028.
Date published: June 1, 2018Featured in this article: XiuFeng “Henry” Wan.
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Erratum: Zoonotic risk, pathogenesis, and transmission of avian-origin H3N2 canine influenza virus. [J Virol, 91, 21, (2017) (e00637-17)] DOI: 10.1128/JVI.00637-17. Sun H, Blackmon S, Yang G, Waters K, Li T, Tangwangvivat R, Xu Y, Shyu D, Wen F, Cooley J, Senter L, Lin X, Jarman R, Hanson L, Webby R, Wan X-F. Journal of Virology; 92(8):e02227-17.
Date published: April 1, 2018Featured in this article: XiuFeng “Henry” Wan.
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A Y161F hemagglutinin substitution increases thermostability and improves yields of 2009 H1N1 influenza A virus in cells. Wen F, Li L, Zhao N, Chiang M-J, Xie-H, Cooley J, Webby R, Wang PG, Wan X-F. Journal of Virology; 92(2):e01621-17.
Date published: January 1, 2018Featured in this article: XiuFeng “Henry” Wan.
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2017
Zoonotic risk, pathogenesis, and transmission of avian-origin H3N2 canine influenza virus. Sun H, Blackmon S, Yang G, Waters K, Li T, Tangwangvivat R, Xu Y, Shyu D, Wen F, Cooley J, Senter L, Lin X, Jarman R, Hanson L, Webby R, Wan X-F. Journal of Virology; 91(21):e00637-17.
Date published: November 1, 2017Featured in this article: XiuFeng “Henry” Wan.
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Differential Effects of Prior Influenza Exposures on H3N2 Cross-reactivity of Human Postvaccination Sera. Xie H, Li L, Ye Z, Li X, Plant EP, Zoueva O, Zhao Y, Jing X, Lin Z, Kawano T, Chiang M-J, Finch CL, Kosikova M, Zhang A, Zhu Y, Wan X-F. Clinical Infectious Diseases; 65(2):259-267.
Date published: July 15, 2017Featured in this article: XiuFeng “Henry” Wan.
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Low-pathogenic influenza A viruses in North American diving ducks contribute to the emergence of a novel highly pathogenic influenza A(H7N8) virus. Xu Y, Ramey AM, Bowman AS, DeLiberto TJ, Killian ML, Krauss S, Nolting JM, Torchetti MK, Reeves AB, Webby RJ, Stallknecht DE, Wan X-F. Journal of Virology; 91(9):e02208-16.
Date published: May 1, 2017Featured in this article: XiuFeng “Henry” Wan.
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Pathogenicity and transmission of a swine influenza A(H6N6) virus. Sun H, Kaplan BS, Guan M, Zhang G, Ye J, Long L-P, Blackmon S, Yang C-K, Chiang M-J, Xie H, Zhao N, Cooley J, Smith DF, Liao M, Cardona C, Li L, Wang GP, Webby R, Wan X-F. Emerging Microbes and Infections; 6(4):e17.
Date published: April 12, 2017Featured in this article: XiuFeng “Henry” Wan.
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Detection of antigenic variants of subtype H3 swine influenza A viruses from clinical samples. Martin BE, Bowman AS, Li L, Nolting JM, Smith DR, Hanson LA, Wan X-F. Journal of Clinical Microbiology; 55(4):1037-1045.
Date published: April 1, 2017Featured in this article: XiuFeng “Henry” Wan.
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HA triggers the switch from MEK1 SUMOylation to phosphorylation of the ERK pathway in influenza A virus-infected cells and facilitates its infection. Wang C, Liu H, Luo J, Chen L, Li M, Su W, Zhao N, Liu S, Xie L, Jia Y, Ding H, Wan X, He H. Frontiers in Cellular and Infection Microbiology; 7(FEB):27.
Date published: February 7, 2017Featured in this article: XiuFeng “Henry” Wan.
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Serological evidence for high prevalence of Influenza D Viruses in Cattle, Nebraska, United States, 2003–2004. Luo J, Ferguson L, Smith DR, Woolums AR, Epperson WB, Wan X-F. Virology; 501:88-91.
Date published: January 15, 2017Featured in this article: XiuFeng “Henry” Wan.
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Feral swine in the United States have been exposed to both avian and swine influenza A viruses. Martin BE, Sun H, Carrel M, Cunningham FL, Baroch JA, Hanson-Dorr KC, Young SG, Schmit B, Nolting JM, Yoon K-J, Lutman MW, Pedersen K, Lager K, Bowman AS, Slemons RD, Smith DR, DeLiberto T, Wan X-F. Applied and Environmental Microbiology; 83(19):e01346-17.
Date published: January 1, 2017Featured in this article: XiuFeng “Henry” Wan.
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Decoding glycan protein interactions by a new class of asymmetric N-glycans. Wu Z, Liu Y, Li L, Wan X-F, Zhu H, Guo Y, Wei M, Guan W, Wang PG. Organic and Biomolecular Chemistry; 15(42):8946-8951.
Date published: January 1, 2017Featured in this article: XiuFeng “Henry” Wan.
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2016
A quantitative RT-PCR assay for rapid detection of Eurasian-lineage H10 subtype influenza A virus. Sun H, Xue J-L, Bailey E, Xu Y, Hu G, Baroch J, Zhang Y, Pace L, DeLiberto TJ, Wan X-F. Virologica Sinica; 31(5):444-447.
Date published: October 1, 2016Featured in this article: XiuFeng “Henry” Wan.
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Generalized hierarchical sparse model for arbitrary-order interactive antigenic sites identification in flu virus data. Han L, Zhang Y, Wan X-F, Zhang T. Proceedings of the ACM SIGKDD International Conference on Knowledge Discovery and Data Mining; 13-17-August-2016:865-874.
Date published: August 13, 2016Featured in this article: XiuFeng “Henry” Wan.
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Pathogenesis of influenza D virus in cattle. Ferguson L, Olivier AK, Genova S, Epperson WB, Smith DR, Schneider L, Barton K, McCuan K, Webby RJ, Wan X-F. Journal of Virology; 90(12):5636-5642.
Date published: June 1, 2016Featured in this article: XiuFeng “Henry” Wan.
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Antigenic characterization of H3 subtypes of avian influenza a viruses from North America. Bailey E, Long L-P, Zhao N, Hall JS, Baroch JA, Nolting J, Senter L, Cunningham FL, Pharr GT, Hanson L, Slemons R, Deliberto TJ, Wan X-F. Avian Diseases; 60(1):346-353.
Date published: May 1, 2016Featured in this article: XiuFeng “Henry” Wan.
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Detection of avian H7N9 influenza a viruses in the yangtze delta region of China during early H7N9 outbreaks. Li Y, Huang X-M, Zhao D-M, Liu Y-Z, He K-W, Liu Y-X, Chen C-H, Long L-P, Xu Y, Xie X-X, Han K-K, Liu X-Y, Yang J, Zhang Y-F, Fan F, Webby R, Wan X-F. Avian Diseases; 60(1):118-125.
Date published: May 1, 2016Featured in this article: XiuFeng “Henry” Wan.
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Limited Antigenic Diversity in Contemporary H7 Avian-Origin Influenza A Viruses from North America. Xu Y, Bailey E, Spackman E, Li T, Wang H, Long L-P, Baroch JA, Cunningham FL, Lin X, Jarman RG, DeLiberto TJ, Wan X-F. Scientific Reports; 6:20688.
Date published: February 9, 2016Featured in this article: XiuFeng “Henry” Wan.
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2015
Influenza D virus infection in Mississippi beef cattle. Ferguson L, Eckard L, Epperson WB, Long L-P, Smith D, Huston C, Genova S, Webby R, Wan X-F. Virology; 486:28-34.
Date published: December 1, 2015Featured in this article: XiuFeng “Henry” Wan.
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Erratum to Testing the Effect of Internal Genes Derived from a Wild-Bird-Origin H9N2 Influenza A Virus on the Pathogenicity of an A/H7N9 Virus, [Cell Reports, 12, (2015) 1831-1841]. Su W, Wang C, Luo J, Zhao Y, Wu Y, Chen L, Zhao N, Li M, Xing C, Liu H, Zhang H, Chang Y-F, Li T, Ding H, Wan X, He H. Cell Reports; 13(6):1283.
Date published: November 10, 2015Featured in this article: XiuFeng “Henry” Wan.
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Association analyses of large-scale glycan microarray data reveal novel host-specific substructures in influenza A virus binding glycans. Zhao N, Martin BE, Yang C-K, Luo F, Wan X-F. Scientific Reports; 5:15778.
Date published: October 28, 2015Featured in this article: XiuFeng “Henry” Wan.
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H3N2 Mismatch of 2014-15 Northern Hemisphere Influenza Vaccines and Head-to-head Comparison between Human and Ferret Antisera derived Antigenic Maps. Xie H, Wan X-F, Ye Z, Plant EP, Zhao Y, Xu Y, Li X, Finch C, Zhao N, Kawano T, Zoueva O, Chiang M-J, Jing X, Lin Z, Zhang A, Zhu Y. Scientific Reports; 5:15279.
Date published: October 16, 2015Featured in this article: XiuFeng “Henry” Wan.
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Testing the Effect of Internal Genes Derived from a Wild-Bird-Origin H9N2 Influenza A Virus on the Pathogenicity of an A/H7N9 Virus. Su W, Wang C, Luo J, Zhao Y, Wu Y, Chen L, Zhao N, Li M, Xing C, Liu H, Zhang H, Chang Y-F, Li T, Ding H, Wan X, He H. Cell Reports; 12(11):1831-1841.
Date published: September 22, 2015Featured in this article: XiuFeng “Henry” Wan.
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Dynamics of virus shedding and antibody responses in influenza A virus-infected feral swine. Sun H, Cunningham FL, Harris J, Xu Y, Long L-P, Hanson-Dorr K, Baroch JA, Fioranelli P, Lutman MW, Li T, Pedersen K, Schmit BS, Cooley J, Lin X, Jarman RG, Deliberto TJ, Wan X-F. Journal of General Virology; 96(9):2569-2578.
Date published: September 1, 2015Featured in this article: XiuFeng “Henry” Wan.
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Error-prone pcr-based mutagenesis strategy for rapidly generating high-yield influenza vaccine candidates. Ye J, Wen F, Xu Y, Zhao N, Long L, Sun H, Yang J, Cooley J, Todd Pharr G, Webby R, Wan X-F. Virology; 482:234-243.
Date published: August 1, 2015Featured in this article: XiuFeng “Henry” Wan.
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Identification of the source of A (H10N8) virus causing human infection. Xu Y, Cao H, Liu H, Sun H, Martin B, Zhao Y, Wang Q, Deng G, Xue J, Zong Y, Zhu J, Wen F, Long L-P, Wong S-S, Zhao N, Fu X, Liao M, Hu G, Webby R, Gao GF, Wan X-F. Infection, Genetics and Evolution; 30:159-163.
Date published: March 1, 2015Featured in this article: XiuFeng “Henry” Wan.
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Detection of influenza antigenic variants directly from clinical samples using polyclonal antibody based proximity ligation assays. Martin BE, Jia K, Sun H, Ye J, Hall C, Ware D, Wan X-F. Virology; 476:151-158.
Date published: February 1, 2015Featured in this article: XiuFeng “Henry” Wan.
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Proteomic analysis of Mycoplasma gallisepticum vaccine strain F. Collier SD, Branton SL, Evans JD, Leigh SA, Wan X-F, Cooksey AM, Olanrewaju HA, Pharr GT. International Journal of Poultry Science; 14(1):1-12.
Date published: January 1, 2015Featured in this article: XiuFeng “Henry” Wan.
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2014
Variation in protection of four divergent avian influenza virus vaccine seed strains against eight clade 2.2.1 and 2.2.1.1. Egyptian H5N1 high pathogenicity variants in poultry. Spackman E, Swayne DE, Pantin-Jackwood MJ, Wan X-F, Torchetti MK, Hassan M, Suarez DL, Sá e Silva M. Influenza and other Respiratory Viruses; 8(6):654-662.
Date published: November 1, 2014Featured in this article: XiuFeng “Henry” Wan.
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Use of serological and mucosal immune responses to Mycoplasma hyopneumoniae antigens P97R1, P46 and P36 in the diagnosis of infection. Feng Z-X, Bai Y, Yao J-T, Pharr GT, Wan X-F, Xiao S-B, Chi L-Z, Gan Y, Wang H-Y, Wei Y-N, Liu M-J, Xiong Q-Y, Bai F-F, Li B, Wu X-S, Shao G-Q. Veterinary Journal; 202(1):128-133.
Date published: October 1, 2014Featured in this article: XiuFeng “Henry” Wan.
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Sequence-based antigenic change prediction by a sparse learning method incorporating co-evolutionary information. Yang J, Zhang T, Wan X-F. PLoS ONE; 9(9):e106660.
Date published: September 4, 2014Featured in this article: XiuFeng “Henry” Wan.
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Potency, Efficacy, and Antigenic Mapping of H7 Avian Influenza Virus Vaccines Against the 2012 H7N3 Highly Pathogenic Avian Influenza Virus from Mexico. Spackman E, Wan X-F, Kapczynski D, Xu Y, Pantin-Jackwood M, Suarez DL, Swayne D. Avian Diseases; 58(3):359-366.
Date published: September 1, 2014Featured in this article: XiuFeng “Henry” Wan.
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Influenza A subtype H3 viruses in feral swine, United States, 2011-2012. Feng Z, Baroch JA, Long L-P, Xu Y, Cunningham FL, Pedersen K, Lutman MW, Schmit BS, Bowman AS, DeLiberto TJ, Wan X-F. Emerging Infectious Diseases; 20(5):843-846.
Date published: May 1, 2014Featured in this article: XiuFeng “Henry” Wan.
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Antigenic and genetic evolution of low-pathogenicity avian influenza viruses of subtype H7N3 following heterologous vaccination. Beato MS, Xu Y, Long L-P, Capua I, Wan X-F. Clinical and Vaccine Immunology; 21(5):603-612.
Date published: May 1, 2014Featured in this article: XiuFeng “Henry” Wan.
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Quartet-based methods to reconstruct phylogenetic networks. Yang J, Li J, Grünewald S, Xu Y, Wan X-F. BMC System Biology; 8(1):21.
Date published: February 20, 2014Featured in this article: XiuFeng “Henry” Wan.
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2013
Development and validation of an attenuated Mycoplasma hyopneumoniae aerosol vaccine. Feng Z-X, Wei Y-N, Li G-L, Lu X-M, Wan X-F, Pharr GT, Wang Z-W, Kong M, Gan Y, Bai F-F, Liu M-J, Xiong Q-Y, Wu X-S, Shao G-Q. Veterinary Microbiology; 167(3-4):417-424.
Date published: December 27, 2013Featured in this article: XiuFeng “Henry” Wan.
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Perspective on emergence and re-emergence of amantadine resistant influenza A viruses in domestic animals in China. Wan X-F, Carrel M, Long L-P, Alker AP, Emch M. Infection, Genetics and Evolution; 20:298-303.
Date published: December 1, 2013Featured in this article: XiuFeng “Henry” Wan.
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Mutation tryptophan to leucine at position 222 of haemagglutinin could facilitate H3N2 influenza A virus infection in dogs. Yang G, Li S, Blackmon S, Ye J, Bradley KC, Cooley J, Smith D, Hanson L, Cardona C, Steinhauer DA, Webby R, Liao M, Wan X-F. Journal of General Virology; 94(PART 12):2599-2608.
Date published: December 1, 2013Featured in this article: XiuFeng “Henry” Wan.
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Extreme evolutionary conservation of functionally important regions in H1N1 influenza proteome. Warren S, Wan X-F, Conant G, Korkin D. PLoS ONE; 8(11):e81027.
Date published: November 25, 2013Featured in this article: XiuFeng “Henry” Wan.
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Mutation from arginine to lysine at the position 189 of hemagglutinin contributes to the antigenic drift in H3N2 swine influenza viruses. Ye J, Xu Y, Harris J, Sun h, Bowman AS, Cunningham F, Cardona C, Yoon KJ, Slemons RD, Wan X-F. Virology; 446(1-2):225-229.
Date published: November 1, 2013Featured in this article: XiuFeng “Henry” Wan.
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BinAligner: A heuristic method to align biological networks. Yang J, Li J, Grünewald S, Wan X-F. BMC Bioinformatics; 14(SUPPL.14):S8.
Date published: October 9, 2013Featured in this article: XiuFeng “Henry” Wan.
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Molecular basis for broad neuraminidase immunity: Conserved epitopes in seasonal and pandemic H1N1 as well as H5N1 influenza viruses. Wan H, Gao J, Xu K, Chen H, Couzens LK, Rivers KH, Easterbrook JD, Yang K, Zhong L, Rajabi M, Ye J, Sultana I, Wan X-F, Liu X, Perez DR, Taubenberger JK, Eichelberger MC. Journal of Virology; 87(16):9290-9300.
Date published: August 1, 2013Featured in this article: XiuFeng “Henry” Wan.
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A Joint Matrix Completion and Filtering Model for Influenza Serological Data Integration. Yuan X-T, Zhang T, Wan X-F. PLoS ONE; 8(7):e69842.
Date published: July 25, 2013Featured in this article: XiuFeng “Henry” Wan.
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Using sequence data to infer the antigenicity of influenza virus. Sun H, Yang J, Zhang T, Long L-P, Jia K, Yang G, Webby RJ, Wan X-F. mBio; 4(4):e00230-13.
Date published: July 2, 2013Featured in this article: XiuFeng “Henry” Wan.
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Antigenic characterization of H3N2 influenza a viruses from ohio agricultural fairs. Feng Z, Gomez J, Bowman AS, Ye J, Long L-P, Nelson SW, Yang J, Martin B, Jia K, Nolting JM, Cunningham F, Cardona C, Zhang J, Yoon K-J, Slemons RD, Wan X-F. Journal of Virology; 87(13):7655-7667.
Date published: July 1, 2013Featured in this article: XiuFeng “Henry” Wan.
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Detection of African swine fever virus-like sequences in ponds in the Mississippi Delta through metagenomic sequencing. Wan X-F, Barnett JL, Cunningham F, Chen S, Yang G, Nash S, Long L-P, Ford L, Blackmon S, Zhang Y, Hanson L, He Q. Virus Genes; 46(3):441-446.
Date published: June 1, 2013Featured in this article: XiuFeng “Henry” Wan.
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Quartet-net: A quartet-based method to reconstruct phylogenetic networks. Yang J, Grünewald S, Wan X-F. Molecular Biology and Evolution; 30(5):1206-1217.
Date published: May 1, 2013Featured in this article: XiuFeng “Henry” Wan.
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A Perspective on Multiple Waves of Influenza Pandemics. Mummert A, Weiss H, Long L-P, Amigó JM, Wan X-F. PLoS ONE; 8(4):e60343.
Date published: April 23, 2013Featured in this article: XiuFeng “Henry” Wan.
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Antigenic characterization of recent H5N1 highly pathogenic avian influenza viruses circulating in Egyptian poultry. Beato MS, Mancin M, Yang J, Buratin A, Ruffa M, Maniero S, Fusaro A, Terregino C, Wan X-F, Capua I. Virology; 435(2):350-356.
Date published: January 20, 2013Featured in this article: XiuFeng “Henry” Wan.
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2012
Identifying antigenicity-associated sites in highly pathogenic H5N1 influenza virus hemagglutinin by using sparse learning. Cai Z, Ducatez MF, Yang J, Zhang T, Long L-P, Boon AC, Webby RJ, Wan X-F. Journal of Molecular Biology; 422(1):145-155.
Date published: September 7, 2012Featured in this article: XiuFeng “Henry” Wan.
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Population-environment drivers of H5N1 avian influenza molecular change in Vietnam. Carrel MA, Emch M, Nguyen T, Todd Jobe R, Wan X-F. Health and Place; 18(5):1122-1131.
Date published: September 1, 2012Featured in this article: XiuFeng “Henry” Wan.
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Lessons from Emergence of A/Goose/Guangdong/1996-Like H5N1 Highly Pathogenic Avian Influenza Viruses and Recent Influenza Surveillance Efforts in Southern China. Wan X-F. Zoonoses and Public Health; 59(SUPPL.2):32-42.
Date published: September 1, 2012Featured in this article: XiuFeng “Henry” Wan.
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A triclade DNA vaccine designed on the basis of a comprehensive serologic study elicits neutralizing antibody responses against all clades and subclades of highly pathogenic avian influenza H5N1 Viruses. Zhou F, Wang G, Buchy P, Cai Z, Chen H, Chen Z, Cheng G, Wan X-F, Deubel V, Zhou P. Journal of Virology; 86(12):6970-6978.
Date published: July 1, 2012Featured in this article: XiuFeng “Henry” Wan.
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AntigenMap 3D: An online antigenic cartography resource. Barnett JL, Yang J, Cai Z, Zhang T, Wan X-F. Bioinformatics; 28(9):1292-1293.
Date published: May 1, 2012Featured in this article: XiuFeng “Henry” Wan.
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A quantitative structure-activity relationship (QSAR) study on glycan array data to determine the specificities of glycan-binding proteins. Xuan P, Zhang Y, Tzeng T-RJ, Wan X-F, Luo F. Glycobiology; 22(4):552-560.
Date published: April 1, 2012Featured in this article: XiuFeng “Henry” Wan.
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Highly pathogenic H5N1 avian influenza viruses exhibit few barriers to gene flow in Vietnam. Carrel M, Wan X-F, Nguyen T, Emch M. EcoHealth; 9(1):60-69.
Date published: March 1, 2012Featured in this article: XiuFeng “Henry” Wan.
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Antigenic distance measurements for seasonal influenza vaccine selection. Cai Z, Zhang T, Wan X-F. Vaccine; 30(2):448-453.
Date published: January 5, 2012Featured in this article: XiuFeng “Henry” Wan.
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Mixture model analysis reflecting dynamics of the population diversity of 2009 pandemic H1N1 influenza virus. Long L-P, Yaun C, Cai Z, Xu H, Wan X-F. In Silico Biology; 11(5):225-236.
Date published: January 1, 2012Featured in this article: XiuFeng “Henry” Wan.
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2011
Genetic variation of highly pathogenic H5N1 avian influenza viruses in vietnam shows both species-specific and spatiotemporal associations. Carrel M, Wan X-F, Nguyen T, Emch M. Avian Diseases; 55(4):659-666.
Date published: December 1, 2011Featured in this article: XiuFeng “Henry” Wan.
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Indications that live poultry markets are a major source of human H5N1 influenza virus infection in China. Wan X-F, Dong L, Lan Y, Long L-P, Xu C, Zou S, Li Z, Wen L, Cai Z, Wang W, Li X, Yuan F, Sui H, Zhang Y, Dong J, Sun S, Gao Y, Wang M, Bai T, Yang L, Li D, Yang W, Yu H, Wang S, Feng Z, Wang Y, Guo Y, Webby RJ, Shu Y. Journal of Virology; 85(24):13432-13438.
Date published: December 1, 2011Featured in this article: XiuFeng “Henry” Wan.
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Extent of antigenic cross-reactivity among highly pathogenic H5N1 influenza viruses. Ducatez MF, Cai Z, Peiris M, Guan Y, Ye Z, Wan X-F, Webby RJ. Journal of Clinical Microbiology; 49(10):3531-3536.
Date published: October 1, 2011Featured in this article: XiuFeng “Henry” Wan.
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Identification of an H6N6 swine influenza virus in southern China. Zhang G, Kong W, Qi W, Long L-P, Cao Z, Huang L, Qi H, Cao N, Wang W, Zhao F, Ning Z, Liao M, Wan X-F. Infection, Genetics and Evolution; 11(5):1174-1177.
Date published: July 1, 2011Featured in this article: XiuFeng “Henry” Wan.
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SO2426 is a positive regulator of siderophore expression in Shewanella oneidensis MR-1. Henne KL, Wan X-F, Wei W, Thompson DK. BMC Microbiology; 11:125.
Date published: January 1, 2011Featured in this article: XiuFeng “Henry” Wan.
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2010
Avian-origin H3N2 canine influenza A viruses in Southern China. Li S, Shi Z, Jiao P, Zhang G, Zhong Z, Tian W, Long L-P, Cai Z, Zhu X, Liao M, Wan X-F. Infection, Genetics and Evolution; 10(8):1286-1288.
Date published: December 10, 2010Featured in this article: XiuFeng “Henry” Wan.
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A computational framework for influenza antigenic cartography. Cai Z, Zhang T, Wan X-F. PLoS Computational Biology; 6(10):1000949.
Date published: October 1, 2010Featured in this article: XiuFeng “Henry” Wan.
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Proteomics inference of genes involved in host adaptation of Mycoplasma gallinarum. Wan X-F, Branton SL, Collier SD, Evans JD, Leigh SA, Pharr GT. Veterinary Microbiology; 145(1-2):177-184.
Date published: September 1, 2010Featured in this article: XiuFeng “Henry” Wan.
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Spatiotemporal structure of molecular evolution of H5N1 highly pathogenic avian influenza viruses in Vietnam. Carrel MA, Emch M, Jobe RT, Moody A, Wan X-F. PLoS ONE; 5(1):e8631.
Date published: January 8, 2010Featured in this article: XiuFeng “Henry” Wan.
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Development of Chemical Bond based Elastic Network Model and its application in identifying functional motions in H5N1 highly pathogenic avian influenza viruses. Jang Y, Wan X-F. International Journal of Bioinformatics Research and Applications; 6(1):1-11.
Date published: January 1, 2010Featured in this article: XiuFeng “Henry” Wan.
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2009
High-Throughput Technologies and Functional Genomics. Wan X-F, Thompson DK. Systems Biology and Synthetic Biology; 67-113.
Date published: September 22, 2009Featured in this article: XiuFeng “Henry” Wan.
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Advances in molecular evolution of influenza a virus. Wan X-F, Emch M, Zhao Z-M. Global View of the Fight Against Influenza; 31-57.
Date published: July 1, 2009Featured in this article: XiuFeng “Henry” Wan.
Characterization of a highly pathogenic avian influenza H5N1 virus sublineage in poultry seized at ports of entry into Vietnam. Nguyen T, Davis CT, Stembridge W, Shu B, Balish A, Inui K, Do HT, Ngo HT, Wan X-F, McCarron M, Lindstrom SE, Cox NJ, Nguyen CV, Klimov AI, Donis RO. Virology; 387(2):250-256.
Date published: May 10, 2009Featured in this article: XiuFeng “Henry” Wan.
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Core and periphery structures in protein interaction networks. Luo F, Li B, Wan X-F, Scheuermann RH. BMC Bioinformatics; 10(SUPPL. 4):S8.
Date published: April 29, 2009Featured in this article: XiuFeng “Henry” Wan.
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2008
Exploring core/periphery structures in protein interaction networks provides structure-property relation insights. Grindinger T, Luo F, Wan X-F, Scheuermann RH. Proceedings - IEEE International Conference on Bioinformatics and Biomedicine, BIBM 2008; 179-186.
Date published: November 3, 2008Featured in this article: XiuFeng “Henry” Wan.
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Evolution of highly pathogenic H5N1 avian influenza viruses in Vietnam between 2001 and 2007. Wan X-F, Nguyen T, Davis CT, Smith CB, Zhao Z-M, Carrel M, Inui K, Do HT, Mai DT, Jadhao S, Balish A, Shu B, Luo F, Emch M, Matsuoka Y, Lindstrom SE, Cox NJ, Nguyen CV, Klimov A, Donis RO. PLoS ONE; 3(10):e3462.
Date published: October 21, 2008Featured in this article: XiuFeng “Henry” Wan.
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Transcriptome analysis reveals response regulator SO2426-mediated gene expression in Shewanella oneidensis MR-1 under chromate challenge. Chourey K, Wei W, Wan X-F, Thompson DK. BMC Genomics; 9:395.
Date published: August 21, 2008Featured in this article: XiuFeng “Henry” Wan.
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Generation and validation of a Shewanella oneidensis MR-1 clone set for protein expression and phage display. Gao H, Pattison D, Yan T, Klingeman DM, Wang X, Petrosino J, Hemphill L, Wan X, Leaphart AB, Weinstock GM, Palzkill T, Zhou J. PLoS ONE; 3(8):e2983.
Date published: August 20, 2008Featured in this article: XiuFeng “Henry” Wan.
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Identifying a few foot-and-mouth disease virus signature nucleotide strings for computational genotyping. Lin G, Cai Z, Wu J, Wan X-F, Xu L, Goebel R. BMC Bioinformatics; 9:279.
Date published: June 13, 2008Featured in this article: XiuFeng “Henry” Wan.
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Transcriptional analysis of a major capsid protein gene from Spodoptera exigua ascovirus 5a. Salem TZ, Turney CM, Wang L, Xue J, Wan X-F, Cheng X-W. Archives of Virology; 153(1):149-162.
Date published: January 1, 2008Featured in this article: XiuFeng “Henry” Wan.
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Ubiquitous reassortments in influenza a viruses. Wan X-F, Ozden M, Lin G. Journal of Bioinformatics and Computational Biology; 6(5):981-999.
Date published: January 1, 2008Featured in this article: XiuFeng “Henry” Wan.
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Genotypic diversity of H5N1 highly pathogenic avian influenza viruses. Zhao Z-M, Shortridge KF, Garcia M, Guan Y, Wan X-F. Journal of General Virology; 89(9):2182-2193.
Date published: January 1, 2008Featured in this article: XiuFeng “Henry” Wan.
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2007
A quantitative genotype algorithm reflecting H5N1 Avian influenza niches. Wan X-F, Chen G, Luo F, Emch M, Donis R. Bioinformatics; 23(18):2368-2375.
Date published: September 15, 2007Featured in this article: XiuFeng “Henry” Wan.
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Nucleotide composition string selection in HIV-1 subtyping using whole genomes. Wu X, Cai Z, Wan X-F, Hoang T, Goebel R, Lin G. Bioinformatics; 23(14):1744-1752.
Date published: July 15, 2007Featured in this article: XiuFeng “Henry” Wan.
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CodonO: Codon usage bias analysis within and across genomes. Angellotti MC, Bhuiyan SB, Chen G, Wan X-F. Nucleic Acids Research; 35(SUPPL.2):W132-W136.
Date published: July 1, 2007Featured in this article: XiuFeng “Henry” Wan.
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Relationship between genome similarity and DNA-DNA hybridization among closely related bacteria. Kang C-H, Nam Y-D, Chung W-H, Quan Z-X, Park Y-H, Park S-J, Desmone R, Wan X-F, Rhee S-K. Journal of Microbiology and Biotechnology; 17(6):645-651.
Date published: June 1, 2007Featured in this article: XiuFeng “Henry” Wan.
Ascovirus and its evolution. Cheng X-W, Wan X-F, Xue J, Moore RC. Virologica Sinica; 22(2):137-147.
Date published: April 1, 2007Featured in this article: XiuFeng “Henry” Wan.
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Development and assessment of scoring functions for protein identification using PMF data. Zhao S, Chen L, Ganapathy A, Wan X-F, Brechenmacher L, Tao N, Emerich D, Stacey G, Xu D. Electrophoresis; 28(5):864-870.
Date published: March 1, 2007Featured in this article: XiuFeng “Henry” Wan, Gary Stacey, Dong Xu.
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Computational identification of reassortments in avian influenza viruses. Wan X-F, Wu X, Lin G, Holton SB, Desmone RA, Shyu C-R, Guan Y, Emch ME. Avian Diseases; 51(SUPPL. 1):434-439.
Date published: January 1, 2007Featured in this article: XiuFeng “Henry” Wan.
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2006
Rnall: An efficient algorithm for predicting RNA local secondary structural landscape in genomes. Wan X-F, Lin G, Xu D. Journal of Bioinformatics and Computational Biology; 4(5):1015-1031.
Date published: October 1, 2006Featured in this article: XiuFeng “Henry” Wan, Dong Xu.
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Temporal transcriptomic analysis as Desulfovibrio vulgaris Hildenborough transitions into stationary phase during electron donor depletion. Clark ME, He Q, He Z, Huang KH, Alm EJ, Wan X-F, Hazen TC, Arkin AP, Wall JD, Zhou J-Z, Fields MW. Applied and Environmental Microbiology; 72(8):5578-5588.
Date published: August 1, 2006Featured in this article: XiuFeng “Henry” Wan.
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The ribosomal shunt translation strategy of Cauliflower mosaic virus has evolved from ancient long terminal repeats. Shababi M, Bourque J, Palanichelvam K, Cole A, Xu D, Wan X-F, Schoelz J. Journal of Virology; 80(8):3811-3822.
Date published: April 1, 2006Featured in this article: Dong Xu, XiuFeng “Henry” Wan.
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CodonO: A new informatics method for measuring synonymous codon usage bias within and across genomes. Wan X-F, Zhou J, Xu D. International Journal of General Systems; 35(1):109-125.
Date published: February 1, 2006Featured in this article: XiuFeng “Henry” Wan, Dong Xu.
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Transcriptome profiling of Shewanella oneidensis gene expression following exposure to acidic and alkaline pH. Leaphart AB, Thompson DK, Huang K, Alm E, Wan X-F, Arkin A, Brown SD, Wu L, Yan T, Liu X, Wickham GS, Zhou J. Journal of Bacteriology; 188(4):1633-1642.
Date published: February 1, 2006Featured in this article: XiuFeng “Henry” Wan.
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Phylogenetic analysis using complete signature information of whole genomes and clustered Neighbour-Joining method. Wu X, Wan X-F, Wu G, Xu D, Lin G. International Journal of Bioinformatics Research and Applications; 2(3):219-248.
Date published: January 1, 2006Featured in this article: XiuFeng “Henry” Wan, Dong Xu.
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2005
Computational methods for remote homolog identification. Wan X-F, Xu D. Current Protein and Peptide Science; 6(6):527-546.
Date published: December 1, 2005Featured in this article: XiuFeng “Henry” Wan, Dong Xu.
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Design of long oligonucleotide probes for functional gene detection in a microbial community. Chung W-H, Rhee S-K, Wan X-F, Bae J-W, Quan Z-X, Park Y-H. Bioinformatics; 21(22):4092-4100.
Date published: November 15, 2005Featured in this article: XiuFeng “Henry” Wan.
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Whole genome phylogeny based on clustered signature string composition. Wu X, Lin G, Wan X-F, Xu D. 2005 IEEE Computational Systems Bioinformatics Conference, Workshops and Poster Abstracts; 53-54.
Date published: August 8, 2005Featured in this article: XiuFeng “Henry” Wan, Dong Xu.
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Intrinsic terminator prediction and its application in synechococcus sp. WH8102. Wan X-F, Xu D. Journal of Computer Science and Technology; 20(4):465-482.
Date published: July 1, 2005Featured in this article: XiuFeng “Henry” Wan, Dong Xu.
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Genetic characterization of H5N1 avian influenza viruses isolated in southern China during the 2003-04 avian influenza outbreaks: Brief report. Wan X-F, Ren T, Luo K-J, Liao M, Zhang G-H, Chen J-D, Cao W-S, Li Y, Jin N-Y, Xu D, Xin C-A. Archives of Virology; 150(6):1257-1266.
Date published: June 1, 2005Featured in this article: XiuFeng “Henry” Wan, Dong Xu.
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2004
Transcriptomic and proteomic characterization of the Fur modulon in the metal-reducing bacterium Shewanella oneidensis. Wan X-F, VerBerkmoes NC, McCue LA, Stanek D, Connelly H, Hauser LJ, Wu L, Liu X, Yan T, Leaphart A, Hettich RL, Zhou J, Thompson DK. Journal of Bacteriology; 186(24):8385-8400.
Date published: December 1, 2004Featured in this article: XiuFeng “Henry” Wan.
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Statistical assessment for mass-spec protein identification using peptide fingerprinting approach. Ganapathy A, Wan X-F, Wan J, Thelen J, Emerich DW, Stacey G, Xu D. Annual International Conference of the IEEE Engineering in Medicine and Biology - Proceedings; 26 IV:3051-3054.
Date published: September 1, 2004Featured in this article: XiuFeng “Henry” Wan, Jay Thelen, Gary Stacey, Dong Xu.
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Revealing gene transcription and translation initiation patterns in archaea, using an interactive clustering model. Wan X-F, Bridges SM, Boyle JA. Extremophiles; 8(4):291-299.
Date published: August 1, 2004Featured in this article: XiuFeng “Henry” Wan.
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Detection of genes involved in biodegradation and biotransformation in microbial communities by using 50-mer oligonucleotide microarrays. Rhee S-K, Liu X, Wu L, Chong SC, Wan X, Zhou J. Applied and Environmental Microbiology; 70(7):4303-4317.
Date published: July 1, 2004Featured in this article: XiuFeng “Henry” Wan.
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Quantitative relationship between synonymous codon usage bias and GC composition across unicellular genomes. Wan X-F, Xu D, Kleinhofs A, Zhou J. BMC Evolutionary Biology; 4:19.
Date published: June 28, 2004Featured in this article: XiuFeng “Henry” Wan, Dong Xu.
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Identification and Initial Characterization of a Putative Mycoplasma gallinarum Leucine Aminopeptidase Gene. Wan X, Branton SL, Hanson LA, Pharr GT. Current Microbiology; 48(1):32-38.
Date published: January 1, 2004Featured in this article: XiuFeng “Henry” Wan.
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Expression and subcellular location of a leucine aminopeptidase of Mycoplasma Gallinarum. Wan X, Branton SL, Hughlett MB, Hanson LA, Pharr GT. International Journal of Poultry Science; 3(1):70-74.
Date published: January 1, 2004Featured in this article: XiuFeng “Henry” Wan.
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2003
A new informatics method for measuring synonymous codon usage bias. Wan X, Zhou J, Xu D. Intelligent Engineering Systems Through Artificial Neural Networks; 13:1011-1018.
Date published: November 2, 2003Featured in this article: XiuFeng “Henry” Wan, Dong Xu.
2002
Interactive clustering for exploration of genomic data. Wan X, Bridges SM, Boyle JA, Boyle AP. Intelligent Engineering Systems Through Artificial Neural Networks; 12:753-758.
Date published: November 10, 2002Featured in this article: XiuFeng “Henry” Wan.
Characterization of pMGA genes from the F – strain (vaccine strain) of Mycoplasma gallisepticum. Pharr GT, Branton SL, Hanson LA, Minion FC, Hughlett MB, Wan X. International Journal of Poultry Science; 1(4):63-73.
Date published: January 1, 2002Featured in this article: XiuFeng “Henry” Wan.
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