People
Henry Wan
2021
SARS-CoV-2 show no infectivity at later stages in a prolonged COVID-19 patient despite positivity in RNA testing. Wan X-F, Tang CY, Ritter D, Wang Y, Li T, Segovia K, Kosikova M, Johnson M, Kwon HJ, Xie H, Hammer RD, McElroy JA. Journal of Medical Virology; 93(7):4570-4575.
Date published: July 1, 2021Featured in this article: XiuFeng “Henry” Wan, Cynthia Tang, Yang Wang, Marc Johnson.
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2013
Perspective on emergence and re-emergence of amantadine resistant influenza A viruses in domestic animals in China. Wan X-F, Carrel M, Long L-P, Alker AP, Emch M. Infection, Genetics and Evolution; 20:298-303.
Date published: December 1, 2013Featured in this article: XiuFeng “Henry” Wan, Liping Long.
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Quartet-net: A quartet-based method to reconstruct phylogenetic networks. Yang J, Grünewald S, Wan X-F. Molecular Biology and Evolution; 30(5):1206-1217.
Date published: May 1, 2013Featured in this article: XiuFeng “Henry” Wan.
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A Perspective on Multiple Waves of Influenza Pandemics. Mummert A, Weiss H, Long L-P, Amigó JM, Wan X-F. PLoS ONE; 8(4):e60343.
Date published: April 23, 2013Featured in this article: Liping Long, XiuFeng “Henry” Wan.
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Antigenic characterization of recent H5N1 highly pathogenic avian influenza viruses circulating in Egyptian poultry. Beato MS, Mancin M, Yang J, Buratin A, Ruffa M, Maniero S, Fusaro A, Terregino C, Wan X-F, Capua I. Virology; 435(2):350-356.
Date published: January 20, 2013Featured in this article: XiuFeng “Henry” Wan.
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2012
Identifying antigenicity-associated sites in highly pathogenic H5N1 influenza virus hemagglutinin by using sparse learning. Cai Z, Ducatez MF, Yang J, Zhang T, Long L-P, Boon AC, Webby RJ, Wan X-F. Journal of Molecular Biology; 422(1):145-155.
Date published: September 7, 2012Featured in this article: Liping Long, XiuFeng “Henry” Wan.
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Population-environment drivers of H5N1 avian influenza molecular change in Vietnam. Carrel MA, Emch M, Nguyen T, Todd Jobe R, Wan X-F. Health and Place; 18(5):1122-1131.
Date published: September 1, 2012Featured in this article: XiuFeng “Henry” Wan.
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Lessons from Emergence of A/Goose/Guangdong/1996-Like H5N1 Highly Pathogenic Avian Influenza Viruses and Recent Influenza Surveillance Efforts in Southern China. Wan X-F. Zoonoses and Public Health; 59(SUPPL.2):32-42.
Date published: September 1, 2012Featured in this article: XiuFeng “Henry” Wan.
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A triclade DNA vaccine designed on the basis of a comprehensive serologic study elicits neutralizing antibody responses against all clades and subclades of highly pathogenic avian influenza H5N1 Viruses. Zhou F, Wang G, Buchy P, Cai Z, Chen H, Chen Z, Cheng G, Wan X-F, Deubel V, Zhou P. Journal of Virology; 86(12):6970-6978.
Date published: July 1, 2012Featured in this article: XiuFeng “Henry” Wan.
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AntigenMap 3D: An online antigenic cartography resource. Barnett JL, Yang J, Cai Z, Zhang T, Wan X-F. Bioinformatics; 28(9):1292-1293.
Date published: May 1, 2012Featured in this article: XiuFeng “Henry” Wan.
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A quantitative structure-activity relationship (QSAR) study on glycan array data to determine the specificities of glycan-binding proteins. Xuan P, Zhang Y, Tzeng T-RJ, Wan X-F, Luo F. Glycobiology; 22(4):552-560.
Date published: April 1, 2012Featured in this article: XiuFeng “Henry” Wan.
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Highly pathogenic H5N1 avian influenza viruses exhibit few barriers to gene flow in Vietnam. Carrel M, Wan X-F, Nguyen T, Emch M. EcoHealth; 9(1):60-69.
Date published: March 1, 2012Featured in this article: XiuFeng “Henry” Wan.
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Antigenic distance measurements for seasonal influenza vaccine selection. Cai Z, Zhang T, Wan X-F. Vaccine; 30(2):448-453.
Date published: January 5, 2012Featured in this article: XiuFeng “Henry” Wan.
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Mixture model analysis reflecting dynamics of the population diversity of 2009 pandemic H1N1 influenza virus. Long L-P, Yaun C, Cai Z, Xu H, Wan X-F. In Silico Biology; 11(5):225-236.
Date published: January 1, 2012Featured in this article: Liping Long, XiuFeng “Henry” Wan.
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2011
Genetic variation of highly pathogenic H5N1 avian influenza viruses in vietnam shows both species-specific and spatiotemporal associations. Carrel M, Wan X-F, Nguyen T, Emch M. Avian Diseases; 55(4):659-666.
Date published: December 1, 2011Featured in this article: XiuFeng “Henry” Wan.
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Indications that live poultry markets are a major source of human H5N1 influenza virus infection in China. Wan X-F, Dong L, Lan Y, Long L-P, Xu C, Zou S, Li Z, Wen L, Cai Z, Wang W, Li X, Yuan F, Sui H, Zhang Y, Dong J, Sun S, Gao Y, Wang M, Bai T, Yang L, Li D, Yang W, Yu H, Wang S, Feng Z, Wang Y, Guo Y, Webby RJ, Shu Y. Journal of Virology; 85(24):13432-13438.
Date published: December 1, 2011Featured in this article: XiuFeng “Henry” Wan, Liping Long.
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Extent of antigenic cross-reactivity among highly pathogenic H5N1 influenza viruses. Ducatez MF, Cai Z, Peiris M, Guan Y, Ye Z, Wan X-F, Webby RJ. Journal of Clinical Microbiology; 49(10):3531-3536.
Date published: October 1, 2011Featured in this article: XiuFeng “Henry” Wan.
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Identification of an H6N6 swine influenza virus in southern China. Zhang G, Kong W, Qi W, Long L-P, Cao Z, Huang L, Qi H, Cao N, Wang W, Zhao F, Ning Z, Liao M, Wan X-F. Infection, Genetics and Evolution; 11(5):1174-1177.
Date published: July 1, 2011Featured in this article: Liping Long, XiuFeng “Henry” Wan.
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SO2426 is a positive regulator of siderophore expression in Shewanella oneidensis MR-1. Henne KL, Wan X-F, Wei W, Thompson DK. BMC Microbiology; 11:125.
Date published: January 1, 2011Featured in this article: XiuFeng “Henry” Wan.
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2010
Avian-origin H3N2 canine influenza A viruses in Southern China. Li S, Shi Z, Jiao P, Zhang G, Zhong Z, Tian W, Long L-P, Cai Z, Zhu X, Liao M, Wan X-F. Infection, Genetics and Evolution; 10(8):1286-1288.
Date published: December 10, 2010Featured in this article: Liping Long, XiuFeng “Henry” Wan.
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A computational framework for influenza antigenic cartography. Cai Z, Zhang T, Wan X-F. PLoS Computational Biology; 6(10):1000949.
Date published: October 1, 2010Featured in this article: XiuFeng “Henry” Wan.
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Proteomics inference of genes involved in host adaptation of Mycoplasma gallinarum. Wan X-F, Branton SL, Collier SD, Evans JD, Leigh SA, Pharr GT. Veterinary Microbiology; 145(1-2):177-184.
Date published: September 1, 2010Featured in this article: XiuFeng “Henry” Wan.
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Spatiotemporal structure of molecular evolution of H5N1 highly pathogenic avian influenza viruses in Vietnam. Carrel MA, Emch M, Jobe RT, Moody A, Wan X-F. PLoS ONE; 5(1):e8631.
Date published: January 8, 2010Featured in this article: XiuFeng “Henry” Wan.
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Development of Chemical Bond based Elastic Network Model and its application in identifying functional motions in H5N1 highly pathogenic avian influenza viruses. Jang Y, Wan X-F. International Journal of Bioinformatics Research and Applications; 6(1):1-11.
Date published: January 1, 2010Featured in this article: XiuFeng “Henry” Wan.
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2009
High-Throughput Technologies and Functional Genomics. Wan X-F, Thompson DK. Systems Biology and Synthetic Biology; 67-113.
Date published: September 22, 2009Featured in this article: XiuFeng “Henry” Wan.
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Advances in molecular evolution of influenza a virus. Wan X-F, Emch M, Zhao Z-M. Global View of the Fight Against Influenza; 31-57.
Date published: July 1, 2009Featured in this article: XiuFeng “Henry” Wan.
Characterization of a highly pathogenic avian influenza H5N1 virus sublineage in poultry seized at ports of entry into Vietnam. Nguyen T, Davis CT, Stembridge W, Shu B, Balish A, Inui K, Do HT, Ngo HT, Wan X-F, McCarron M, Lindstrom SE, Cox NJ, Nguyen CV, Klimov AI, Donis RO. Virology; 387(2):250-256.
Date published: May 10, 2009Featured in this article: XiuFeng “Henry” Wan.
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Core and periphery structures in protein interaction networks. Luo F, Li B, Wan X-F, Scheuermann RH. BMC Bioinformatics; 10(SUPPL. 4):S8.
Date published: April 29, 2009Featured in this article: XiuFeng “Henry” Wan.
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2008
Exploring core/periphery structures in protein interaction networks provides structure-property relation insights. Grindinger T, Luo F, Wan X-F, Scheuermann RH. Proceedings - IEEE International Conference on Bioinformatics and Biomedicine, BIBM 2008; 179-186.
Date published: November 3, 2008Featured in this article: XiuFeng “Henry” Wan.
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Evolution of highly pathogenic H5N1 avian influenza viruses in Vietnam between 2001 and 2007. Wan X-F, Nguyen T, Davis CT, Smith CB, Zhao Z-M, Carrel M, Inui K, Do HT, Mai DT, Jadhao S, Balish A, Shu B, Luo F, Emch M, Matsuoka Y, Lindstrom SE, Cox NJ, Nguyen CV, Klimov A, Donis RO. PLoS ONE; 3(10):e3462.
Date published: October 21, 2008Featured in this article: XiuFeng “Henry” Wan.
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Transcriptome analysis reveals response regulator SO2426-mediated gene expression in Shewanella oneidensis MR-1 under chromate challenge. Chourey K, Wei W, Wan X-F, Thompson DK. BMC Genomics; 9:395.
Date published: August 21, 2008Featured in this article: XiuFeng “Henry” Wan.
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Generation and validation of a Shewanella oneidensis MR-1 clone set for protein expression and phage display. Gao H, Pattison D, Yan T, Klingeman DM, Wang X, Petrosino J, Hemphill L, Wan X, Leaphart AB, Weinstock GM, Palzkill T, Zhou J. PLoS ONE; 3(8):e2983.
Date published: August 20, 2008Featured in this article: XiuFeng “Henry” Wan.
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Identifying a few foot-and-mouth disease virus signature nucleotide strings for computational genotyping. Lin G, Cai Z, Wu J, Wan X-F, Xu L, Goebel R. BMC Bioinformatics; 9:279.
Date published: June 13, 2008Featured in this article: XiuFeng “Henry” Wan.
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Transcriptional analysis of a major capsid protein gene from Spodoptera exigua ascovirus 5a. Salem TZ, Turney CM, Wang L, Xue J, Wan X-F, Cheng X-W. Archives of Virology; 153(1):149-162.
Date published: January 1, 2008Featured in this article: XiuFeng “Henry” Wan.
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Ubiquitous reassortments in influenza a viruses. Wan X-F, Ozden M, Lin G. Journal of Bioinformatics and Computational Biology; 6(5):981-999.
Date published: January 1, 2008Featured in this article: XiuFeng “Henry” Wan.
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Genotypic diversity of H5N1 highly pathogenic avian influenza viruses. Zhao Z-M, Shortridge KF, Garcia M, Guan Y, Wan X-F. Journal of General Virology; 89(9):2182-2193.
Date published: January 1, 2008Featured in this article: XiuFeng “Henry” Wan.
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2007
A quantitative genotype algorithm reflecting H5N1 Avian influenza niches. Wan X-F, Chen G, Luo F, Emch M, Donis R. Bioinformatics; 23(18):2368-2375.
Date published: September 15, 2007Featured in this article: XiuFeng “Henry” Wan.
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Nucleotide composition string selection in HIV-1 subtyping using whole genomes. Wu X, Cai Z, Wan X-F, Hoang T, Goebel R, Lin G. Bioinformatics; 23(14):1744-1752.
Date published: July 15, 2007Featured in this article: XiuFeng “Henry” Wan.
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CodonO: Codon usage bias analysis within and across genomes. Angellotti MC, Bhuiyan SB, Chen G, Wan X-F. Nucleic Acids Research; 35(SUPPL.2):W132-W136.
Date published: July 1, 2007Featured in this article: XiuFeng “Henry” Wan.
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Relationship between genome similarity and DNA-DNA hybridization among closely related bacteria. Kang C-H, Nam Y-D, Chung W-H, Quan Z-X, Park Y-H, Park S-J, Desmone R, Wan X-F, Rhee S-K. Journal of Microbiology and Biotechnology; 17(6):645-651.
Date published: June 1, 2007Featured in this article: XiuFeng “Henry” Wan.
Ascovirus and its evolution. Cheng X-W, Wan X-F, Xue J, Moore RC. Virologica Sinica; 22(2):137-147.
Date published: April 1, 2007Featured in this article: XiuFeng “Henry” Wan.
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Development and assessment of scoring functions for protein identification using PMF data. Zhao S, Chen L, Ganapathy A, Wan X-F, Brechenmacher L, Tao N, Emerich D, Stacey G, Xu D. Electrophoresis; 28(5):864-870.
Date published: March 1, 2007Featured in this article: XiuFeng “Henry” Wan, Gary Stacey, Dong Xu.
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Computational identification of reassortments in avian influenza viruses. Wan X-F, Wu X, Lin G, Holton SB, Desmone RA, Shyu C-R, Guan Y, Emch ME. Avian Diseases; 51(SUPPL. 1):434-439.
Date published: January 1, 2007Featured in this article: XiuFeng “Henry” Wan.
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2006
Rnall: An efficient algorithm for predicting RNA local secondary structural landscape in genomes. Wan X-F, Lin G, Xu D. Journal of Bioinformatics and Computational Biology; 4(5):1015-1031.
Date published: October 1, 2006Featured in this article: XiuFeng “Henry” Wan, Dong Xu.
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Temporal transcriptomic analysis as Desulfovibrio vulgaris Hildenborough transitions into stationary phase during electron donor depletion. Clark ME, He Q, He Z, Huang KH, Alm EJ, Wan X-F, Hazen TC, Arkin AP, Wall JD, Zhou J-Z, Fields MW. Applied and Environmental Microbiology; 72(8):5578-5588.
Date published: August 1, 2006Featured in this article: XiuFeng “Henry” Wan.
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The ribosomal shunt translation strategy of Cauliflower mosaic virus has evolved from ancient long terminal repeats. Shababi M, Bourque J, Palanichelvam K, Cole A, Xu D, Wan X-F, Schoelz J. Journal of Virology; 80(8):3811-3822.
Date published: April 1, 2006Featured in this article: Dong Xu, XiuFeng “Henry” Wan.
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CodonO: A new informatics method for measuring synonymous codon usage bias within and across genomes. Wan X-F, Zhou J, Xu D. International Journal of General Systems; 35(1):109-125.
Date published: February 1, 2006Featured in this article: XiuFeng “Henry” Wan, Dong Xu.
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Transcriptome profiling of Shewanella oneidensis gene expression following exposure to acidic and alkaline pH. Leaphart AB, Thompson DK, Huang K, Alm E, Wan X-F, Arkin A, Brown SD, Wu L, Yan T, Liu X, Wickham GS, Zhou J. Journal of Bacteriology; 188(4):1633-1642.
Date published: February 1, 2006Featured in this article: XiuFeng “Henry” Wan.
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Phylogenetic analysis using complete signature information of whole genomes and clustered Neighbour-Joining method. Wu X, Wan X-F, Wu G, Xu D, Lin G. International Journal of Bioinformatics Research and Applications; 2(3):219-248.
Date published: January 1, 2006Featured in this article: XiuFeng “Henry” Wan, Dong Xu.
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2005
Computational methods for remote homolog identification. Wan X-F, Xu D. Current Protein and Peptide Science; 6(6):527-546.
Date published: December 1, 2005Featured in this article: XiuFeng “Henry” Wan, Dong Xu.
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Design of long oligonucleotide probes for functional gene detection in a microbial community. Chung W-H, Rhee S-K, Wan X-F, Bae J-W, Quan Z-X, Park Y-H. Bioinformatics; 21(22):4092-4100.
Date published: November 15, 2005Featured in this article: XiuFeng “Henry” Wan.
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Whole genome phylogeny based on clustered signature string composition. Wu X, Lin G, Wan X-F, Xu D. 2005 IEEE Computational Systems Bioinformatics Conference, Workshops and Poster Abstracts; 53-54.
Date published: August 8, 2005Featured in this article: XiuFeng “Henry” Wan, Dong Xu.
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Intrinsic terminator prediction and its application in synechococcus sp. WH8102. Wan X-F, Xu D. Journal of Computer Science and Technology; 20(4):465-482.
Date published: July 1, 2005Featured in this article: XiuFeng “Henry” Wan, Dong Xu.
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Genetic characterization of H5N1 avian influenza viruses isolated in southern China during the 2003-04 avian influenza outbreaks: Brief report. Wan X-F, Ren T, Luo K-J, Liao M, Zhang G-H, Chen J-D, Cao W-S, Li Y, Jin N-Y, Xu D, Xin C-A. Archives of Virology; 150(6):1257-1266.
Date published: June 1, 2005Featured in this article: XiuFeng “Henry” Wan, Dong Xu.
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2004
Transcriptomic and proteomic characterization of the Fur modulon in the metal-reducing bacterium Shewanella oneidensis. Wan X-F, VerBerkmoes NC, McCue LA, Stanek D, Connelly H, Hauser LJ, Wu L, Liu X, Yan T, Leaphart A, Hettich RL, Zhou J, Thompson DK. Journal of Bacteriology; 186(24):8385-8400.
Date published: December 1, 2004Featured in this article: XiuFeng “Henry” Wan.
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Statistical assessment for mass-spec protein identification using peptide fingerprinting approach. Ganapathy A, Wan X-F, Wan J, Thelen J, Emerich DW, Stacey G, Xu D. Annual International Conference of the IEEE Engineering in Medicine and Biology - Proceedings; 26 IV:3051-3054.
Date published: September 1, 2004Featured in this article: XiuFeng “Henry” Wan, Jinrong Wan, Jay Thelen, Gary Stacey, Dong Xu.
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Revealing gene transcription and translation initiation patterns in archaea, using an interactive clustering model. Wan X-F, Bridges SM, Boyle JA. Extremophiles; 8(4):291-299.
Date published: August 1, 2004Featured in this article: XiuFeng “Henry” Wan.
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Detection of genes involved in biodegradation and biotransformation in microbial communities by using 50-mer oligonucleotide microarrays. Rhee S-K, Liu X, Wu L, Chong SC, Wan X, Zhou J. Applied and Environmental Microbiology; 70(7):4303-4317.
Date published: July 1, 2004Featured in this article: XiuFeng “Henry” Wan.
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Quantitative relationship between synonymous codon usage bias and GC composition across unicellular genomes. Wan X-F, Xu D, Kleinhofs A, Zhou J. BMC Evolutionary Biology; 4:19.
Date published: June 28, 2004Featured in this article: XiuFeng “Henry” Wan, Dong Xu.
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Identification and Initial Characterization of a Putative Mycoplasma gallinarum Leucine Aminopeptidase Gene. Wan X, Branton SL, Hanson LA, Pharr GT. Current Microbiology; 48(1):32-38.
Date published: January 1, 2004Featured in this article: XiuFeng “Henry” Wan.
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Expression and subcellular location of a leucine aminopeptidase of Mycoplasma Gallinarum. Wan X, Branton SL, Hughlett MB, Hanson LA, Pharr GT. International Journal of Poultry Science; 3(1):70-74.
Date published: January 1, 2004Featured in this article: XiuFeng “Henry” Wan.
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2003
A new informatics method for measuring synonymous codon usage bias. Wan X, Zhou J, Xu D. Intelligent Engineering Systems Through Artificial Neural Networks; 13:1011-1018.
Date published: November 2, 2003Featured in this article: XiuFeng “Henry” Wan, Dong Xu.
2002
Interactive clustering for exploration of genomic data. Wan X, Bridges SM, Boyle JA, Boyle AP. Intelligent Engineering Systems Through Artificial Neural Networks; 12:753-758.
Date published: November 10, 2002Featured in this article: XiuFeng “Henry” Wan.
Characterization of pMGA genes from the F – strain (vaccine strain) of Mycoplasma gallisepticum. Pharr GT, Branton SL, Hanson LA, Minion FC, Hughlett MB, Wan X. International Journal of Poultry Science; 1(4):63-73.
Date published: January 1, 2002Featured in this article: XiuFeng “Henry” Wan.
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